This post will help explain the function, and benefits of using a prokinetic and how it can affect SIBO.
What is a prokinetic
The word means promoting (pro) and move (kinetic), so it’s about promoting movement.
Prokinetic supplements and medicines help to amplify and coordinate the gastrointestinal muscular contractions to facilitate the transit of the contents of your digestive tract.
This means they are useful to encourage the movement of food through the upper part of the gut, and also the migrating motor complex (MMC).
This means prokinetics can do two things for helping manage your SIBO:
- Stimulate and co-ordinate the passage of foods through the intestine, though influencing the nervous system to increase the smooth muscle contractions.
- May decrease transit time but they aren’t meant to cause a bowel movement like a laxative would (see below for more on that aspect).
Prokinetics can work on the upper GI tract, or the whole digestive system. They are particularly helpful for symptoms where motility isn’t effective and things are either moving back upwards, or stagnating.
You could be experiencing upward movement of air (frequent burping), nausea or acid reflux (where stomach acid burns the oesophagus). Prokinetics may be helpful for promoting stomach emptying and upper gastrointestinal symptoms.
You can also use prokinetics for symptoms like:
- Feeling very full / Stomach not emptying quickly
- Bloating
- Gas
- Constipation

Prokinetics aren’t the same as laxatives
As I mentioned above, prokinetics shouldn’t be confused with laxatives. The differences are as follows:
- Laxatives should cause a bowel movement either through increasing bulk, bringing water into the gut, or stimulating the large intestine to evacuate.
- Laxatives don’t stimulate the migrating motor complex (you can read more about the internal house keeper which keeps your gut clean – the migrating motor complex)
- Prokinetics won’t stimulate a bowel movement, and can be used with people who have IBS-D.
The way they work is by acting on neurotransmitters that control our gut motility.
Medical prokinetics include Domperidone (often used for sickness), Naltrexone, Erythromycin, Prucalopride. These last three are taken at a very low dose to create the prokinetic effect, at a higher dose they have antibiotic effects.
Herbal prokinetic supplements
Herbal prokinetic include ginger which has a long history of traditional use for nausea and sickness. Ginger is also an antioxidant anti-inflammatory agent which can support immune health which might also help in SIBO.
You also can try taking ginger to help you eat more if nausea and fullness is preventing you from eating a a proper sized meal and you’re worried about weight loss.
When should you take a prokinetic for SIBO?
Firstly, it’s important to note that prokinetics are only part of the solution for SIBO. You also need to work on diet, eating habits, and lifestyle changes such as sleep, exercise and stress management. Just popping some supplements won’t help on its own!
There are two cases when a prokinetic might be helpful
- As soon as you’ve finished your round of antibiotic or antimicrobial supplements to address the SIBO the prokinetic could help to stimulate the MMC. This could help slow down the SIBO relapse (and unfortunately you might well relapse after a round of treatment). Taking the prokinetic before bed is best to help the overnight fast enable the MMC process.
- To improve symptoms such as nausea, feelings of fullness and belching. You can take the prokinetic alongside your treatment for SIBO such as the antimicrobial herbal supplements.

When should you take a prokinetic for SIBO?
Firstly, it’s important to note that prokinetics are only part of the solution for SIBO. You also need to work on diet, eating habits, and lifestyle changes such as sleep, exercise and stress management. Just popping some supplements won’t help on its own!
There are two cases when a prokinetic might be helpful
- As soon as you’ve finished your round of antibiotic or antimicrobial supplements to address the SIBO the prokinetic could help to stimulate the MMC. This could help slow down the SIBO relapse (and unfortunately you might well relapse after a round of treatment). Taking the prokinetic before bed is best to help the overnight fast enable the MMC process.
- To improve symptoms such as nausea, feelings of fullness and belching. You can take the prokinetic alongside your treatment for SIBO such as the antimicrobial herbal supplements.
How long should you take a prokinetic for?
Prokinetics can be taken for a few months at a time. Some people will take them for longer. You can test reducing your dose gradually, perhaps only taking it on alternate days as you feel better, or after around 3 months. Just notice if any symptoms return. Then you can slowly reduce your prokinetic to every 3-4 days, and so on.
If you do feel symptoms are coming back you can revert back to your full dose to see if you can stop the SIBO returning. You could also add in some antimicrobial treatment at this time to knock the bacteria on the head and prevent another relapse of the SIBO.
Are there any risks of taking prokinetics?
You may experience some side effects such as
- Diarrhoea
- Bloating – this is because foods are being moved through the gut quicker, and if it’s not getting enough time to digest it could impair digestion causing bloating.
- Pain – stimulation of smooth muscles in your digestive tract which might irritate your visceral hypersensitivity.
- Acid reflux – particularly at the start of taking a prokinetic, if you’re very constipated you might feel
- Ginger burn – you might feel better drinking more water with your ginger supplements to help wash it down.
Taking a prokinetic may not prevent your SIBO relapsing. However, it may extend the amount of time you have in between treatment rounds. This means there is more time for working on your lifestyle habits such as changing the way you eat and exercise, stress management, sleep routines etc.
As a SIBO Nutritionist I help people work out what to eat, how to eat and lifestyle changes to help get relief from symptoms. You can email me about setting up a discovery call, or use the form on my Contact page.

Hi I'm Anna Mapson, registered Nutritional Therapist.
I help people with IBS and SIBO get control of unpredictable gut symptoms to find long term relief from painful and embarrassing IBS without restrictive dieting.
I can help you to:
- understand your digestion better, so you recognise your triggers
- eat a well balanced diet, with tasty meals that are simple to prepare
- develop better digestion and more energy
Find more about my 3 month 1:1 Gut Reset programme
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Very helpful article. Anna does a great job of explaining SIBO and ways to manage it.
Thank you Susan. Have you found any specific ways of managing SIBO that really work for you?
Very informative. And well explained as science behind the nutrition
I have taken Canxida, oregano, digestive enzymes, allium, and lots of other things. I do not want to take an antibiotic. I still have stomach problems. Now, I am going to try a prokinetic. Is this a good idea? I try to stay on a Sibo diet or Candida diet, but it is hard.
Would Sibo cause me to have equilibrium problems?
Thank you!
Hi Sandy, SIBO can be really hard to get rid of, I wonder if you’ve identified the root cause, i.e. what was causing you to get SIBO in the first place. Sometimes taking the antimicrobials isn’t effective if you’re still not eating enough food, have obstructions, or a low functioning MMC for example. One of the main problems I see with a long term SIBO diet is you get reduced large intestine bacteria, which can also cause issues. Have you tried reintroducing foods back in to see if you can expand your diet at all? I really hope you get some progress soon, it’s awful going round in circles. If you want to talk about working with me 1:1 just feel free to book some time for a free call so we can see what might be needed. All the best 🙂
Good Day,
Are your services extended outside of the U S. I’m in Bermuda and have been struggling with Sibo, IBS C and leaky gut for years. I did the low fodmap diet, cut out gluten, dairy, nuts, soy, eggs and corn for years. I took the medication two weeks ago but still have no relief. If you are able to assist, I would welcome any advice.
Thank you!